.. image:: ../graphics/Northwestern_purple_RGB.png
   :width: 30%
   :align: right
   :alt: nulogo
   :target: https://amaral.northwestern.edu/

.. _measurement_docs:


Measurement Module
==================

``flyqma.measurement`` provides tools for quantifying reporter fluorescence intensity within individual cell nuclei.


Image Segmentation
------------------

Tools for detecting individual cell nuclei.

.. automodule:: flyqma.measurement.segmentation
   :members:


Expression Measurement
----------------------

Tools for measuring the properties of detected cell nuclei.

.. automodule:: flyqma.measurement.measure
   :members: